Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Lysmd3Q99LE3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Gm10653-202ENSMUST00000139570 835 ntBASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lysmd3Q99LE3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lysmd3Q99LE3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Gm20049-201ENSMUST00000219950 730 ntBASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lysmd3Q99LE3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lysmd3Q99LE3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lysmd3Q99LE3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lysmd3Q99LE3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lysmd3Q99LE3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms