Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp11Q99K46 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Usp11Q99K46 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.7
Usp11Q99K46 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp11Q99K46 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp11Q99K46 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Usp11Q99K46 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Usp11Q99K46 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.45■□□□□ 0.7
Usp11Q99K46 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp11Q99K46 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.44■□□□□ 0.7
Usp11Q99K46 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp11Q99K46 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp11Q99K46 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Usp11Q99K46 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp11Q99K46 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp11Q99K46 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp11Q99K46 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp11Q99K46 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
Usp11Q99K46 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp11Q99K46 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp11Q99K46 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Gm42642-201ENSMUST00000200683 355 ntBASIC19.42■□□□□ 0.7
Usp11Q99K46 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
Usp11Q99K46 Reep4-203ENSMUST00000226563 1444 ntBASIC19.42■□□□□ 0.7
Usp11Q99K46 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp11Q99K46 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.41■□□□□ 0.7
Usp11Q99K46 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp11Q99K46 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Gm42778-201ENSMUST00000199644 553 ntBASIC19.41■□□□□ 0.7
Usp11Q99K46 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp11Q99K46 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Usp11Q99K46 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp11Q99K46 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp11Q99K46 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.4■□□□□ 0.7
Usp11Q99K46 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp11Q99K46 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp11Q99K46 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp11Q99K46 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp11Q99K46 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp11Q99K46 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms