Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rfc4Q99J62 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rfc4Q99J62 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rfc4Q99J62 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.41■■□□□ 1.02
Rfc4Q99J62 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rfc4Q99J62 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Flg-201ENSMUST00000050758 1488 ntBASIC21.4■■□□□ 1.02
Rfc4Q99J62 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.4■■□□□ 1.02
Rfc4Q99J62 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rfc4Q99J62 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Rfc4Q99J62 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rfc4Q99J62 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Gm9987-201ENSMUST00000069768 567 ntBASIC21.39■■□□□ 1.01
Rfc4Q99J62 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Rfc4Q99J62 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rfc4Q99J62 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.38■■□□□ 1.01
Rfc4Q99J62 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rfc4Q99J62 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Gm11927-201ENSMUST00000118472 759 ntBASIC21.37■■□□□ 1.01
Rfc4Q99J62 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rfc4Q99J62 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.37■■□□□ 1.01
Rfc4Q99J62 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.37■■□□□ 1.01
Rfc4Q99J62 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rfc4Q99J62 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.36■■□□□ 1.01
Rfc4Q99J62 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.36■■□□□ 1.01
Rfc4Q99J62 AC121577.1-201ENSMUST00000227302 707 ntBASIC21.36■■□□□ 1.01
Rfc4Q99J62 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rfc4Q99J62 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.35■■□□□ 1.01
Rfc4Q99J62 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Mir5122-201ENSMUST00000175004 89 ntBASIC21.35■■□□□ 1.01
Rfc4Q99J62 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.35■■□□□ 1.01
Rfc4Q99J62 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.35■■□□□ 1.01
Rfc4Q99J62 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.35■■□□□ 1.01
Rfc4Q99J62 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.34■■□□□ 1.01
Rfc4Q99J62 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.34■■□□□ 1.01
Rfc4Q99J62 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rfc4Q99J62 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms