Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc1bQ920F6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc1bQ920F6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.27■■□□□ 1
Smc1bQ920F6 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Smc1bQ920F6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.27■■□□□ 1
Smc1bQ920F6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.27■■□□□ 1
Smc1bQ920F6 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.27■■□□□ 1
Smc1bQ920F6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc1bQ920F6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Smc1bQ920F6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.27■□□□□ 0.99
Smc1bQ920F6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.26■□□□□ 0.99
Smc1bQ920F6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Smc1bQ920F6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Gm715-201ENSMUST00000117865 831 ntBASIC21.25■□□□□ 0.99
Smc1bQ920F6 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.25■□□□□ 0.99
Smc1bQ920F6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Golph3-205ENSMUST00000228671 2842 ntBASIC21.24■□□□□ 0.99
Smc1bQ920F6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smc1bQ920F6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Smc1bQ920F6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc1bQ920F6 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.23■□□□□ 0.99
Smc1bQ920F6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smc1bQ920F6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Smc1bQ920F6 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Smc1bQ920F6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.21■□□□□ 0.99
Smc1bQ920F6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smc1bQ920F6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Smc1bQ920F6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smc1bQ920F6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Gm2559-201ENSMUST00000201323 363 ntBASIC21.19■□□□□ 0.98
Smc1bQ920F6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smc1bQ920F6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.18■□□□□ 0.98
Smc1bQ920F6 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smc1bQ920F6 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.18■□□□□ 0.98
Smc1bQ920F6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms