Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhgc5Q91XW9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC21.09■□□□□ 0.97
Pcdhgc5Q91XW9 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Gm13836-201ENSMUST00000121159 501 ntBASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.08■□□□□ 0.97
Pcdhgc5Q91XW9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhgc5Q91XW9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhgc5Q91XW9 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdhgc5Q91XW9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Gm5643-201ENSMUST00000117081 966 ntBASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Grk6-206ENSMUST00000224995 2971 ntBASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Pcdhgc5Q91XW9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Gm19439-201ENSMUST00000198195 2273 ntBASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhgc5Q91XW9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhgc5Q91XW9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Pcdhgc5Q91XW9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms