Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Tram1Q91V04 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.94■□□□□ 0.14
Tram1Q91V04 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
Tram1Q91V04 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Tram1Q91V04 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Tram1Q91V04 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC15.93■□□□□ 0.14
Tram1Q91V04 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Tram1Q91V04 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Tram1Q91V04 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.93■□□□□ 0.14
Tram1Q91V04 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Tram1Q91V04 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Tram1Q91V04 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Tram1Q91V04 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Tram1Q91V04 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Tram1Q91V04 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Tram1Q91V04 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Tram1Q91V04 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.91■□□□□ 0.14
Tram1Q91V04 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Tram1Q91V04 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.91■□□□□ 0.14
Tram1Q91V04 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Tram1Q91V04 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Tram1Q91V04 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Tram1Q91V04 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tram1Q91V04 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Tram1Q91V04 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Tram1Q91V04 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Gm7417-201ENSMUST00000192950 473 ntBASIC15.89■□□□□ 0.13
Tram1Q91V04 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Tram1Q91V04 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms