Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cspg4Q8VHY0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cspg4Q8VHY0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Flg-201ENSMUST00000050758 1488 ntBASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Odf3b-204ENSMUST00000227834 930 ntBASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cspg4Q8VHY0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cspg4Q8VHY0 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.96■□□□□ 0.14
Cspg4Q8VHY0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Cspg4Q8VHY0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cspg4Q8VHY0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cspg4Q8VHY0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
Cspg4Q8VHY0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Timm23-208ENSMUST00000226683 750 ntBASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Gm7284-201ENSMUST00000131667 944 ntBASIC15.93■□□□□ 0.14
Cspg4Q8VHY0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms