Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdhr1Q8VHP6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdhr1Q8VHP6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cdhr1Q8VHP6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cdhr1Q8VHP6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdhr1Q8VHP6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cdhr1Q8VHP6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cdhr1Q8VHP6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Gm2399-201ENSMUST00000104944 225 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Gm11249-201ENSMUST00000117071 859 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Gm5643-201ENSMUST00000117081 966 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Golph3-202ENSMUST00000226517 2359 ntBASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cdhr1Q8VHP6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdhr1Q8VHP6 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr1Q8VHP6 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr1Q8VHP6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdhr1Q8VHP6 Gm13181-201ENSMUST00000120117 1069 ntBASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms