Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps4aQ8VEJ9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Vps4aQ8VEJ9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps4aQ8VEJ9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Vps4aQ8VEJ9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Vps4aQ8VEJ9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vps4aQ8VEJ9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Vps4aQ8VEJ9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Vps4aQ8VEJ9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.86■□□□□ 0.45
Vps4aQ8VEJ9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms