Protein–RNA interactions for Protein: Q8VEE0

Rpe, Ribulose-phosphate 3-epimerase, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpeQ8VEE0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.8□□□□□ -0.04
RpeQ8VEE0 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.8□□□□□ -0.04
RpeQ8VEE0 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.8□□□□□ -0.04
RpeQ8VEE0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.8□□□□□ -0.04
RpeQ8VEE0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
RpeQ8VEE0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RpeQ8VEE0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Gm13234-201ENSMUST00000120010 747 ntBASIC14.78□□□□□ -0.04
RpeQ8VEE0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RpeQ8VEE0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RpeQ8VEE0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.77□□□□□ -0.04
RpeQ8VEE0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.77□□□□□ -0.05
RpeQ8VEE0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RpeQ8VEE0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RpeQ8VEE0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms