Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx39aQ8VDW0 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx39aQ8VDW0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx39aQ8VDW0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx39aQ8VDW0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Gm2399-201ENSMUST00000104944 225 ntBASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx39aQ8VDW0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx39aQ8VDW0 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx39aQ8VDW0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx39aQ8VDW0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx39aQ8VDW0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx39aQ8VDW0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Gm5643-201ENSMUST00000117081 966 ntBASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx39aQ8VDW0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx39aQ8VDW0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx39aQ8VDW0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx39aQ8VDW0 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.52■□□□□ 0.87
Ddx39aQ8VDW0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms