Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cuedc1Q8R3V6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cuedc1Q8R3V6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Gm6576-201ENSMUST00000169678 883 ntBASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cuedc1Q8R3V6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cuedc1Q8R3V6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Cuedc1Q8R3V6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cuedc1Q8R3V6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms