Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc59Q8R2N0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc59Q8R2N0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc59Q8R2N0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.52■□□□□ 0.4
Ccdc59Q8R2N0 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Ccdc59Q8R2N0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Gm43017-201ENSMUST00000198296 752 ntBASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc59Q8R2N0 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc59Q8R2N0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc59Q8R2N0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms