Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vmn1r228Q8R2A7 Gm13238-201ENSMUST00000117655 780 ntBASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Vmn1r228Q8R2A7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Vmn1r228Q8R2A7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Vmn1r228Q8R2A7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Vmn1r228Q8R2A7 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Vmn1r228Q8R2A7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Serp2-204ENSMUST00000228055 705 ntBASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Vmn1r228Q8R2A7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms