Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Slc38a4Q8R1S9 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Slc38a4Q8R1S9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Gm38205-201ENSMUST00000192243 258 ntBASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Slc38a4Q8R1S9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Slc38a4Q8R1S9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Slc38a4Q8R1S9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Slc38a4Q8R1S9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Slc38a4Q8R1S9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc38a4Q8R1S9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms