Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Nudcd3Q8R1N4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.52■□□□□ 0.55
Nudcd3Q8R1N4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Nudcd3Q8R1N4 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Gm14117-201ENSMUST00000122417 843 ntBASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Gm45102-201ENSMUST00000207427 857 ntBASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Nudcd3Q8R1N4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nudcd3Q8R1N4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nudcd3Q8R1N4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nudcd3Q8R1N4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nudcd3Q8R1N4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Spcs1-204ENSMUST00000226782 949 ntBASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
Nudcd3Q8R1N4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.46■□□□□ 0.54
Nudcd3Q8R1N4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.46■□□□□ 0.54
Nudcd3Q8R1N4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nudcd3Q8R1N4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms