Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rpp40Q8R1F9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Rpp40Q8R1F9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rpp40Q8R1F9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpp40Q8R1F9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.89■□□□□ 0.77
Rpp40Q8R1F9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.89■□□□□ 0.77
Rpp40Q8R1F9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rpp40Q8R1F9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rpp40Q8R1F9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rpp40Q8R1F9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rpp40Q8R1F9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rpp40Q8R1F9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rpp40Q8R1F9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Golph3-205ENSMUST00000228671 2842 ntBASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rpp40Q8R1F9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Gm12527-201ENSMUST00000117967 564 ntBASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms