Protein–RNA interactions for Protein: Q8R0S4

Cacnb4, Voltage-dependent L-type calcium channel subunit beta-4, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb4Q8R0S4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cacnb4Q8R0S4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Cacnb4Q8R0S4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Cacnb4Q8R0S4 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cacnb4Q8R0S4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacnb4Q8R0S4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacnb4Q8R0S4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cacnb4Q8R0S4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cacnb4Q8R0S4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cacnb4Q8R0S4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cacnb4Q8R0S4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacnb4Q8R0S4 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.57■□□□□ 0.24
Cacnb4Q8R0S4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacnb4Q8R0S4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cacnb4Q8R0S4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cacnb4Q8R0S4 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms