Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf7Q8R0S1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf7Q8R0S1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atf7Q8R0S1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Gm6420-201ENSMUST00000193885 723 ntBASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Gm7514-201ENSMUST00000209475 934 ntBASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atf7Q8R0S1 Gm8309-201ENSMUST00000206627 1448 ntBASIC21.89■■□□□ 1.1
Atf7Q8R0S1 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.89■■□□□ 1.1
Atf7Q8R0S1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Atf7Q8R0S1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.89■■□□□ 1.09
Atf7Q8R0S1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Atf7Q8R0S1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atf7Q8R0S1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atf7Q8R0S1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Nespas-201ENSMUST00000143738 1083 ntBASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 AV356131-201ENSMUST00000206201 750 ntBASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.88■■□□□ 1.09
Atf7Q8R0S1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atf7Q8R0S1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Atf7Q8R0S1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Atf7Q8R0S1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Gm10849-201ENSMUST00000100397 618 ntBASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Atf7Q8R0S1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Gm26571-201ENSMUST00000181399 666 ntBASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Atf7Q8R0S1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Atf7Q8R0S1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Atf7Q8R0S1 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Atf7Q8R0S1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Gm8495-201ENSMUST00000188740 694 ntBASIC21.81■■□□□ 1.08
Atf7Q8R0S1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms