Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Gm7461-201ENSMUST00000058918 827 ntBASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ddx54Q8K4L0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ddx54Q8K4L0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Gm45058-201ENSMUST00000205810 766 ntBASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ddx54Q8K4L0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Ddx54Q8K4L0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ddx54Q8K4L0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ddx54Q8K4L0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ddx54Q8K4L0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Gm17971-201ENSMUST00000190239 806 ntBASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC24.36■■□□□ 1.49
Ddx54Q8K4L0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ddx54Q8K4L0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ddx54Q8K4L0 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms