Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Gm43799-201ENSMUST00000201845 579 ntBASIC18.2■□□□□ 0.5
Alms1Q8K4E0 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Gm15378-201ENSMUST00000121894 207 ntBASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Gm10517-202ENSMUST00000192970 758 ntBASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Gm44549-201ENSMUST00000208351 577 ntBASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Alms1Q8K4E0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Alms1Q8K4E0 Gm21362-201ENSMUST00000194272 928 ntBASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Alms1Q8K4E0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Alms1Q8K4E0 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Alms1Q8K4E0 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Alms1Q8K4E0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Alms1Q8K4E0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Alms1Q8K4E0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms