Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
Cchcr1Q8K2I2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Cchcr1Q8K2I2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Cchcr1Q8K2I2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.9■■□□□ 1.1
Cchcr1Q8K2I2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cchcr1Q8K2I2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Gm13146-201ENSMUST00000118508 780 ntBASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.89■■□□□ 1.09
Cchcr1Q8K2I2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Gm9988-201ENSMUST00000069786 435 ntBASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cchcr1Q8K2I2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cchcr1Q8K2I2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cchcr1Q8K2I2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cchcr1Q8K2I2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms