Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sox30Q8CGW4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Fst-202ENSMUST00000223640 2612 ntBASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Tgds-204ENSMUST00000228543 1594 ntBASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sox30Q8CGW4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sox30Q8CGW4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Gm8969-201ENSMUST00000199694 526 ntBASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sox30Q8CGW4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sox30Q8CGW4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.32■□□□□ 0.84
Sox30Q8CGW4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.32■□□□□ 0.84
Sox30Q8CGW4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.31■□□□□ 0.84
Sox30Q8CGW4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sox30Q8CGW4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.3■□□□□ 0.84
Sox30Q8CGW4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sox30Q8CGW4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sox30Q8CGW4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms