Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rdh1Q8CGV4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rdh1Q8CGV4 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Dio3-201ENSMUST00000097228 1449 ntBASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.01■□□□□ 0.47
Rdh1Q8CGV4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rdh1Q8CGV4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Rdh1Q8CGV4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Gm2399-201ENSMUST00000104944 225 ntBASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.98■□□□□ 0.47
Rdh1Q8CGV4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.97■□□□□ 0.47
Rdh1Q8CGV4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rdh1Q8CGV4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rdh1Q8CGV4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Gm11249-201ENSMUST00000117071 859 ntBASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rdh1Q8CGV4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms