Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rab43Q8CG50 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.06■□□□□ 0.48
Rab43Q8CG50 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rab43Q8CG50 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.05■□□□□ 0.48
Rab43Q8CG50 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.05■□□□□ 0.48
Rab43Q8CG50 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.05■□□□□ 0.48
Rab43Q8CG50 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.05■□□□□ 0.48
Rab43Q8CG50 Flg-201ENSMUST00000050758 1488 ntBASIC18.05■□□□□ 0.48
Rab43Q8CG50 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rab43Q8CG50 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rab43Q8CG50 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Gm715-201ENSMUST00000117865 831 ntBASIC18.04■□□□□ 0.48
Rab43Q8CG50 Gm22325-201ENSMUST00000158904 308 ntBASIC18.04■□□□□ 0.48
Rab43Q8CG50 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rab43Q8CG50 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.03■□□□□ 0.48
Rab43Q8CG50 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.03■□□□□ 0.48
Rab43Q8CG50 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rab43Q8CG50 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.02■□□□□ 0.48
Rab43Q8CG50 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rab43Q8CG50 Golph3-202ENSMUST00000226517 2359 ntBASIC18.02■□□□□ 0.48
Rab43Q8CG50 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab43Q8CG50 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab43Q8CG50 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.02■□□□□ 0.48
Rab43Q8CG50 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.02■□□□□ 0.48
Rab43Q8CG50 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rab43Q8CG50 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rab43Q8CG50 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rab43Q8CG50 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.01■□□□□ 0.47
Rab43Q8CG50 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.01■□□□□ 0.47
Rab43Q8CG50 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rab43Q8CG50 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms