Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prpf31Q8CCF0 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Prpf31Q8CCF0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf31Q8CCF0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf31Q8CCF0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Prpf31Q8CCF0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prpf31Q8CCF0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Gm20760-201ENSMUST00000179197 648 ntBASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prpf31Q8CCF0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Gm37856-201ENSMUST00000191634 999 ntBASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Prpf31Q8CCF0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf31Q8CCF0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf31Q8CCF0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Gm44549-201ENSMUST00000208351 577 ntBASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf31Q8CCF0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf31Q8CCF0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf31Q8CCF0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms