Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Vps53Q8CCB4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps53Q8CCB4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps53Q8CCB4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vps53Q8CCB4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vps53Q8CCB4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps53Q8CCB4 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps53Q8CCB4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps53Q8CCB4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Gm22240-201ENSMUST00000175225 82 ntBASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps53Q8CCB4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 BC021767-201ENSMUST00000126387 1716 ntBASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps53Q8CCB4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Golph3-205ENSMUST00000228671 2842 ntBASIC21.47■■□□□ 1.03
Vps53Q8CCB4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gm7290-201ENSMUST00000104990 617 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gm12918-201ENSMUST00000120234 636 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gm15710-201ENSMUST00000121821 636 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gm5075-201ENSMUST00000196916 622 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps53Q8CCB4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.45■■□□□ 1.03
Vps53Q8CCB4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Vps53Q8CCB4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Vps53Q8CCB4 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms