Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SynpoQ8CC35 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SynpoQ8CC35 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Gm27011-201ENSMUST00000182352 972 ntBASIC17.84■□□□□ 0.45
SynpoQ8CC35 Gm38205-201ENSMUST00000192243 258 ntBASIC17.84■□□□□ 0.45
SynpoQ8CC35 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.84■□□□□ 0.45
SynpoQ8CC35 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.84■□□□□ 0.45
SynpoQ8CC35 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SynpoQ8CC35 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynpoQ8CC35 Gm13146-201ENSMUST00000118508 780 ntBASIC17.83■□□□□ 0.44
SynpoQ8CC35 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SynpoQ8CC35 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.83■□□□□ 0.44
SynpoQ8CC35 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynpoQ8CC35 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.83■□□□□ 0.44
SynpoQ8CC35 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SynpoQ8CC35 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynpoQ8CC35 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SynpoQ8CC35 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.82■□□□□ 0.44
SynpoQ8CC35 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.82■□□□□ 0.44
SynpoQ8CC35 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.82■□□□□ 0.44
SynpoQ8CC35 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SynpoQ8CC35 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.81■□□□□ 0.44
SynpoQ8CC35 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.81■□□□□ 0.44
SynpoQ8CC35 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SynpoQ8CC35 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.81■□□□□ 0.44
SynpoQ8CC35 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.8■□□□□ 0.44
SynpoQ8CC35 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SynpoQ8CC35 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms