Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ccdc90bQ8C3X2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Gm22238-201ENSMUST00000175222 88 ntBASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccdc90bQ8C3X2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccdc90bQ8C3X2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ccdc90bQ8C3X2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ccdc90bQ8C3X2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ccdc90bQ8C3X2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ccdc90bQ8C3X2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ccdc90bQ8C3X2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms