Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Gm13148-201ENSMUST00000118892 745 ntBASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Usp44Q8C2S0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Usp44Q8C2S0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Usp44Q8C2S0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Usp44Q8C2S0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Usp44Q8C2S0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Gm6211-202ENSMUST00000167849 925 ntBASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.75■■□□□ 1.07
Usp44Q8C2S0 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Usp44Q8C2S0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Gm12933-201ENSMUST00000120203 872 ntBASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Usp44Q8C2S0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Usp44Q8C2S0 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.72■■□□□ 1.07
Usp44Q8C2S0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Usp44Q8C2S0 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Usp44Q8C2S0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Usp44Q8C2S0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp44Q8C2S0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.7■■□□□ 1.06
Usp44Q8C2S0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Usp44Q8C2S0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Usp44Q8C2S0 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.7■■□□□ 1.06
Usp44Q8C2S0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.7■■□□□ 1.06
Usp44Q8C2S0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms