Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Tsen54Q8C2A2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Gm21956-201ENSMUST00000179946 522 ntBASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Gm43530-201ENSMUST00000195920 274 ntBASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Tsen54Q8C2A2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Tsen54Q8C2A2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Tsen54Q8C2A2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.46■□□□□ 0.06
Tsen54Q8C2A2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tsen54Q8C2A2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Tsen54Q8C2A2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Tsen54Q8C2A2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Mir6236-201ENSMUST00000184437 123 ntBASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Tsen54Q8C2A2 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Tsen54Q8C2A2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms