Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC26.33■■□□□ 1.8
Usp47Q8BY87 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC26.33■■□□□ 1.8
Usp47Q8BY87 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC26.33■■□□□ 1.8
Usp47Q8BY87 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Usp47Q8BY87 Gm22325-201ENSMUST00000158904 308 ntBASIC26.32■■□□□ 1.8
Usp47Q8BY87 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Usp47Q8BY87 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Gm2399-201ENSMUST00000104944 225 ntBASIC26.31■■□□□ 1.8
Usp47Q8BY87 Wnt10b-205ENSMUST00000226846 1204 ntBASIC26.31■■□□□ 1.8
Usp47Q8BY87 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Usp47Q8BY87 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Usp47Q8BY87 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Usp47Q8BY87 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp47Q8BY87 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp47Q8BY87 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp47Q8BY87 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Usp47Q8BY87 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp47Q8BY87 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Usp47Q8BY87 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC26.29■■□□□ 1.8
Usp47Q8BY87 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Gm11249-201ENSMUST00000117071 859 ntBASIC26.28■■□□□ 1.8
Usp47Q8BY87 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Usp47Q8BY87 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC26.27■■□□□ 1.8
Usp47Q8BY87 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Usp47Q8BY87 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
Usp47Q8BY87 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Usp47Q8BY87 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Gm21596-201ENSMUST00000178049 1316 ntBASIC26.25■■□□□ 1.79
Usp47Q8BY87 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Usp47Q8BY87 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Usp47Q8BY87 Gm7856-201ENSMUST00000117514 1493 ntBASIC26.23■■□□□ 1.79
Usp47Q8BY87 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC26.23■■□□□ 1.79
Usp47Q8BY87 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Gm13168-201ENSMUST00000121771 632 ntBASIC26.22■■□□□ 1.79
Usp47Q8BY87 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp47Q8BY87 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms