Protein–RNA interactions for Protein: Q8BVU0

Lrch3, Leucine-rich repeat and calponin homology domain-containing protein 3, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch3Q8BVU0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch3Q8BVU0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Lrch3Q8BVU0 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Lrch3Q8BVU0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Gm17807-201ENSMUST00000186869 298 ntBASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Lrch3Q8BVU0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Gm25016-201ENSMUST00000158399 131 ntBASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch3Q8BVU0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Mir5130-201ENSMUST00000175160 84 ntBASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lrch3Q8BVU0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lrch3Q8BVU0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Gm22697-201ENSMUST00000175194 63 ntBASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lrch3Q8BVU0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lrch3Q8BVU0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lrch3Q8BVU0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lrch3Q8BVU0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms