Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Zfp398Q8BV16 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zfp398Q8BV16 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.58■□□□□ 0.57
Zfp398Q8BV16 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Zfp398Q8BV16 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Zfp398Q8BV16 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Zfp398Q8BV16 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.58■□□□□ 0.57
Zfp398Q8BV16 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Zfp398Q8BV16 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Zfp398Q8BV16 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Zfp398Q8BV16 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Zfp398Q8BV16 Grk6-206ENSMUST00000224995 2971 ntBASIC18.54■□□□□ 0.56
Zfp398Q8BV16 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Zfp398Q8BV16 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Zfp398Q8BV16 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms