Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Lig4Q8BTF7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lig4Q8BTF7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Lig4Q8BTF7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lig4Q8BTF7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lig4Q8BTF7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lig4Q8BTF7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Lig4Q8BTF7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lig4Q8BTF7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lig4Q8BTF7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lig4Q8BTF7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms