Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cpsf4Q8BQZ5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Cpsf4Q8BQZ5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cpsf4Q8BQZ5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Gm27405-201ENSMUST00000184201 112 ntBASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cpsf4Q8BQZ5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Gm38205-201ENSMUST00000192243 258 ntBASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.94■□□□□ 0.46
Cpsf4Q8BQZ5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.93■□□□□ 0.46
Cpsf4Q8BQZ5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cpsf4Q8BQZ5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf4Q8BQZ5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms