Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Prpf18Q8BM39 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Prpf18Q8BM39 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Prpf18Q8BM39 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.58■□□□□ 0.4
Prpf18Q8BM39 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Prpf18Q8BM39 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Prpf18Q8BM39 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Gm21956-201ENSMUST00000179946 522 ntBASIC17.56■□□□□ 0.4
Prpf18Q8BM39 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf18Q8BM39 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf18Q8BM39 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf18Q8BM39 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms