Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 AC107452.1-201ENSMUST00000227963 481 ntBASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.63■■□□□ 1.53
Col16a1Q8BLX7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Golph3-202ENSMUST00000226517 2359 ntBASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Gm18025-201ENSMUST00000221733 862 ntBASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Odf3b-204ENSMUST00000227834 930 ntBASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Col16a1Q8BLX7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Gm6659-201ENSMUST00000174752 547 ntBASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC24.61■■□□□ 1.53
Col16a1Q8BLX7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Gm21362-201ENSMUST00000194272 928 ntBASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col16a1Q8BLX7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col16a1Q8BLX7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Col16a1Q8BLX7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col16a1Q8BLX7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col16a1Q8BLX7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
Col16a1Q8BLX7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col16a1Q8BLX7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Col16a1Q8BLX7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Gm37805-201ENSMUST00000192612 1094 ntBASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Gm10138-203ENSMUST00000206952 366 ntBASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Gm18688-201ENSMUST00000204695 1859 ntBASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Col16a1Q8BLX7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Gm15375-201ENSMUST00000119510 849 ntBASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Gm37292-201ENSMUST00000192062 758 ntBASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Col16a1Q8BLX7 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Otx2os1-204ENSMUST00000227221 751 ntBASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Col16a1Q8BLX7 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms