Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Usp1Q8BJQ2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp1Q8BJQ2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp1Q8BJQ2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Usp1Q8BJQ2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Usp1Q8BJQ2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Gm6576-201ENSMUST00000169678 883 ntBASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Usp1Q8BJQ2 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Mir6982-201ENSMUST00000184354 68 ntBASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Usp1Q8BJQ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Gm11249-201ENSMUST00000117071 859 ntBASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Usp1Q8BJQ2 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Usp1Q8BJQ2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Usp1Q8BJQ2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Usp1Q8BJQ2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms