Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Chmp2bQ8BJF9 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.92■□□□□ 0.62
Chmp2bQ8BJF9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.91■□□□□ 0.62
Chmp2bQ8BJF9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gm40848-201ENSMUST00000221998 324 ntBASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Chmp2bQ8BJF9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Chmp2bQ8BJF9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Chmp2bQ8BJF9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.88■□□□□ 0.61
Chmp2bQ8BJF9 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.88■□□□□ 0.61
Chmp2bQ8BJF9 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2bQ8BJF9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Chmp2bQ8BJF9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
Chmp2bQ8BJF9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms