Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Tdp1Q8BJ37 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tdp1Q8BJ37 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Tdp1Q8BJ37 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Golph3-202ENSMUST00000226517 2359 ntBASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.51■□□□□ 0.87
Tdp1Q8BJ37 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.5■□□□□ 0.87
Tdp1Q8BJ37 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Tdp1Q8BJ37 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Zfp783-201ENSMUST00000095946 670 ntBASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tdp1Q8BJ37 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tdp1Q8BJ37 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tdp1Q8BJ37 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Tdp1Q8BJ37 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Tdp1Q8BJ37 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms