Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf38Q8BI21 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf38Q8BI21 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf38Q8BI21 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
Rnf38Q8BI21 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf38Q8BI21 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.83■□□□□ 0.45
Rnf38Q8BI21 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf38Q8BI21 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Gm43017-201ENSMUST00000198296 752 ntBASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Gm40848-201ENSMUST00000221998 324 ntBASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf38Q8BI21 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Gm38205-201ENSMUST00000192243 258 ntBASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf38Q8BI21 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf38Q8BI21 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf38Q8BI21 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf38Q8BI21 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms