Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Scn3bQ8BHK2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Gm7417-201ENSMUST00000192950 473 ntBASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Scn3bQ8BHK2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Cap2-205ENSMUST00000225824 1634 ntBASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Scn3bQ8BHK2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Scn3bQ8BHK2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Scn3bQ8BHK2 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Scn3bQ8BHK2 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Scn3bQ8BHK2 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms