Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Gm45444-201ENSMUST00000211394 898 ntBASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Atpaf1Q811I0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.15■□□□□ 0.02
Atpaf1Q811I0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Atpaf1Q811I0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Atpaf1Q811I0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Atpaf1Q811I0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Atpaf1Q811I0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms