Protein–RNA interactions for Protein: Q80Y73

UPF0722 protein C11orf88 homolog, mousemouse

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q80Y73 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q80Y73 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Q80Y73 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Q80Y73 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.25■□□□□ 0.67
Q80Y73 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Q80Y73 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.25■□□□□ 0.67
Q80Y73 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Q80Y73 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Q80Y73 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.25■□□□□ 0.67
Q80Y73 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Q80Y73 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.24■□□□□ 0.67
Q80Y73 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.24■□□□□ 0.67
Q80Y73 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Q80Y73 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.24■□□□□ 0.67
Q80Y73 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.23■□□□□ 0.67
Q80Y73 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Q80Y73 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.23■□□□□ 0.67
Q80Y73 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Q80Y73 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Q80Y73 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q80Y73 Iqck-206ENSMUST00000208658 2891 ntBASIC19.22■□□□□ 0.67
Q80Y73 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.22■□□□□ 0.67
Q80Y73 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Q80Y73 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Q80Y73 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Q80Y73 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q80Y73 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q80Y73 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q80Y73 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q80Y73 Gm7290-201ENSMUST00000104990 617 ntBASIC19.21■□□□□ 0.67
Q80Y73 Gm12918-201ENSMUST00000120234 636 ntBASIC19.21■□□□□ 0.67
Q80Y73 Gm15710-201ENSMUST00000121821 636 ntBASIC19.21■□□□□ 0.67
Q80Y73 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Q80Y73 Gm5075-201ENSMUST00000196916 622 ntBASIC19.21■□□□□ 0.67
Q80Y73 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.21■□□□□ 0.67
Q80Y73 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.21■□□□□ 0.67
Q80Y73 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Q80Y73 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q80Y73 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q80Y73 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Q80Y73 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.2■□□□□ 0.66
Q80Y73 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.2■□□□□ 0.66
Q80Y73 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Q80Y73 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.2■□□□□ 0.66
Q80Y73 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q80Y73 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Q80Y73 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q80Y73 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms