Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.3■□□□□ 0.68
Prpf38bQ80SY5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Gm37055-201ENSMUST00000191866 133 ntBASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Gm9987-201ENSMUST00000069768 567 ntBASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prpf38bQ80SY5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prpf38bQ80SY5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prpf38bQ80SY5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prpf38bQ80SY5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.27■□□□□ 0.67
Prpf38bQ80SY5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prpf38bQ80SY5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf38bQ80SY5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Gm12896-201ENSMUST00000118430 226 ntBASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf38bQ80SY5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms