Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ShprhQ7TPQ3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ShprhQ7TPQ3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Gm11539-201ENSMUST00000119837 557 ntBASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Gm13436-201ENSMUST00000120418 567 ntBASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
ShprhQ7TPQ3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Gm30025-201ENSMUST00000218555 728 ntBASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Otx2os1-204ENSMUST00000227221 751 ntBASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Odf3b-204ENSMUST00000227834 930 ntBASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ShprhQ7TPQ3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
ShprhQ7TPQ3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Gm13559-201ENSMUST00000120476 863 ntBASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ShprhQ7TPQ3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ShprhQ7TPQ3 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ShprhQ7TPQ3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Timm23-208ENSMUST00000226683 750 ntBASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ShprhQ7TPQ3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Gm44544-201ENSMUST00000207052 1844 ntBASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ShprhQ7TPQ3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ShprhQ7TPQ3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ShprhQ7TPQ3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ShprhQ7TPQ3 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC26.52■■□□□ 1.84
ShprhQ7TPQ3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC26.52■■□□□ 1.84
ShprhQ7TPQ3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
ShprhQ7TPQ3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms