Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Scn4bQ7M729 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.05■□□□□ 0.48
Scn4bQ7M729 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Scn4bQ7M729 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Gm42642-201ENSMUST00000200683 355 ntBASIC18.04■□□□□ 0.48
Scn4bQ7M729 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Scn4bQ7M729 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scn4bQ7M729 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Gm18671-201ENSMUST00000214826 683 ntBASIC18.02■□□□□ 0.48
Scn4bQ7M729 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scn4bQ7M729 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.47
Scn4bQ7M729 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scn4bQ7M729 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18■□□□□ 0.47
Scn4bQ7M729 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18■□□□□ 0.47
Scn4bQ7M729 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scn4bQ7M729 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Scn4bQ7M729 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn4bQ7M729 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn4bQ7M729 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn4bQ7M729 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn4bQ7M729 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scn4bQ7M729 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scn4bQ7M729 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Gm10033-202ENSMUST00000211874 928 ntBASIC17.98■□□□□ 0.47
Scn4bQ7M729 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4bQ7M729 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms