Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Wnt10b-205ENSMUST00000226846 1204 ntBASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ddx58Q6Q899 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.97■■□□□ 1.27
Ddx58Q6Q899 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ddx58Q6Q899 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Ddx58Q6Q899 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Flg-201ENSMUST00000050758 1488 ntBASIC22.95■■□□□ 1.26
Ddx58Q6Q899 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Gm18666-201ENSMUST00000190039 958 ntBASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx58Q6Q899 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.93■■□□□ 1.26
Ddx58Q6Q899 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx58Q6Q899 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx58Q6Q899 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Gm11927-201ENSMUST00000118472 759 ntBASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Gm37805-201ENSMUST00000192612 1094 ntBASIC22.9■■□□□ 1.26
Ddx58Q6Q899 AC163280.1-201ENSMUST00000228194 1100 ntBASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx58Q6Q899 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Ddx58Q6Q899 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms