Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rif1Q6PR54 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Gm18206-201ENSMUST00000207027 926 ntBASIC15.62■□□□□ 0.09
Rif1Q6PR54 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Flg-201ENSMUST00000050758 1488 ntBASIC15.62■□□□□ 0.09
Rif1Q6PR54 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Rif1Q6PR54 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rif1Q6PR54 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rif1Q6PR54 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Gm9013-201ENSMUST00000132939 882 ntBASIC15.59■□□□□ 0.09
Rif1Q6PR54 Gm7791-201ENSMUST00000219066 539 ntBASIC15.59■□□□□ 0.09
Rif1Q6PR54 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rif1Q6PR54 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.58■□□□□ 0.09
Rif1Q6PR54 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rif1Q6PR54 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rif1Q6PR54 Gm18195-201ENSMUST00000207604 706 ntBASIC15.58■□□□□ 0.09
Rif1Q6PR54 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rif1Q6PR54 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rif1Q6PR54 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.58■□□□□ 0.09
Rif1Q6PR54 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC15.58■□□□□ 0.08
Rif1Q6PR54 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Gm29518-201ENSMUST00000190858 372 ntBASIC15.58■□□□□ 0.08
Rif1Q6PR54 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rif1Q6PR54 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rif1Q6PR54 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Gm2274-201ENSMUST00000184539 609 ntBASIC15.57■□□□□ 0.08
Rif1Q6PR54 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.57■□□□□ 0.08
Rif1Q6PR54 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rif1Q6PR54 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms